Upgrade: DB did not upgrade, but the site works

Okay,

When I did the upgrade the DB said it did not upgrade properly, but the site then worked when I navigated back to the site. However, I can not delete any items now????? Any help would be greatly appreciated! :)

Between which versions were you upgrading?

And by "can't delete items", do you mean that deleting simply doesn't work, or that Omeka displays an error of some kind?

I think it was 1.2.1 and I went to 1.3.2 (something like that)

By can't delete items an error page pops up but does not actually give me an error. This is what I get:

Omeka Has Encountered an Error

To track the contents of this error, please enable error logging. Consult the Omeka codex for information on retrieving error messages.

Try following the instructions at the Codex page on retrieving error messages.

There is no display value code in the .htaccess file

This is what I got:

2011-06-09T18:25:18-06:00 ERR (3): Method named 'findByItem' does not exist or is not callable.
#0 /home4/nolacity/public_html/nolacitymuseum/plugins/ImageAnnotation/plugin.php(317): Omeka_Db_Table->__call('findByItem', Array)
#1 /home4/nolacity/public_html/nolacitymuseum/plugins/ImageAnnotation/plugin.php(317): Omeka_Db_Table->findByItem(Object(Item))
#2 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Omeka/Plugin/Broker.php(149): image_annotation_before_delete_item(Object(Item))
#3 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Omeka/Plugin/Broker.php(175): Omeka_Plugin_Broker->callHook('image_annotatio...', Array)
#4 [internal function]: Omeka_Plugin_Broker->__call('before_delete_i...', Array)
#5 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Omeka/Record.php(301): Omeka_Plugin_Broker->before_delete_item('before_delete_i...', Array)
#6 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Omeka/Record.php(610): Omeka_Record->runCallbacks(Object(Item))
#7 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Omeka/Controller/Action.php(509): Omeka_Record->delete(Array, Array)
#8 /home4/nolacity/public_html/nolacitymuseum/application/controllers/ItemsController.php(119): Omeka_Controller_Action->deleteAction('beforeDelete')
#9 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Zend/Controller/Action.php(513): ItemsController->deleteAction()
#10 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Zend/Controller/Dispatcher/Standard.php(289): Zend_Controller_Action->dispatch()
#11 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Zend/Controller/Front.php(946): Zend_Controller_Dispatcher_Standard->dispatch()
#12 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Zend/Application/Bootstrap/Bootstrap.php(77): Zend_Controller_Front->dispatch('deleteAction')
#13 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Zend/Application.php(358): Zend_Application_Bootstrap_Bootstrap->run(Object(Zend_Controller_Request_Http), Object(Zend_Controller_Response_Http))
#14 /home4/nolacity/public_html/nolacitymuseum/application/libraries/Omeka/Core.php(157): Zend_Application->run()
#15 /home4/nolacity/public_html/nolacitymuseum/admin/index.php(50): Omeka_Core->run()
#16 {main}

The message you're seeing is coming from the ImageAnnotation plugin.

There's an updated version of the ImageAnnotation plugin that's compatible with Omeka 1.3. Upgrading to that version (or deactivating ImageAnnotation) should solve this deletion problem.

Okay,

This worked out great. Now Exhibits seem to be going missing. Any ideas why this would be?

They're missing entirely?

Sounds like you might need to repair your database tables (the process for doing this varies between shared hosts and management panels, but it's usually just called "repair table").